KEGG   Rattus norvegicus (rat): 83589
Entry
83589             CDS       T01003                                 
Symbol
Apba1
Name
(RefSeq) amyloid-beta A4 precursor protein-binding family A member 1
  KO
K04531  amyloid beta A4 precursor protein-binding family A member 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    83589 (Apba1)
Membrane trafficking [BR:rno04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Others
    83589 (Apba1)
 Endocytosis
  Clathrin-mediated endocytosis
   LDLR adaptor proteins
    83589 (Apba1)
SSDB
Motif
Pfam: PID PDZ PDZ_6 PDZ_2 DUF6288 CATSPERG
Other DBs
NCBI-GeneID: 83589
NCBI-ProteinID: NP_113967
RGD: 620844
Ensembl: ENSRNOG00000014928
UniProt: O35430
Structure
Position
1:230790297..230995986
AA seq 841 aa
MNHLEGSAEVEVADEAPGGEVNESVEADLEHPEVEEEQQPQPSPPPPAGHAPEDHRAHPA
PPPPPPPQEEEEERGECLARSASTESGFHNHTDTAEGDVLAAARDGYEAERAQDADDESA
YAVQYRPEAEEYTEQAEAEHAEAAQRRALPNHLHFHSLEHEEAMNAAYSGYVYTHRLFHR
AEDEPYAEPYADYGGLQEHVYEEIGDAPELEARDGLRLYERERDEAAAYRQEALGARLHH
YDERSDGESDSPEKEAEFAPYPRMDSYEQEEDIDQIVAEVKQSMSSQSLDKAAEDMPEAE
QDLERAPTPGGGHPDSPGLPAPAGQQQRVVGTPGGSEVGQRYSKEKRDAISLAIKDIKEA
IEEVKTRTIRSPYTPDEPKEPIWVMRQDISPTRDCDDQRPVDGDSPSPGSSSPLGAESSI
TPLHPGDPTEASTNKESRKSLASFPTYVEVPGPCDPEDLIDGIIFAANYLGSTQLLSDKT
PSKNVRMMQAQEAVSRIKTAQKLAKSRKKAPEGESQPMTEVDLFISTQRIKVLNADTQEP
MMDHPLRTISYIADIGNIVVLMARRRMPRSNSQENVEASHPSQDAKRQYKMICHVFESED
AQLIAQSIGQAFSVAYQEFLRANGINPEDLSQKEYSDLLNTQDMYNDDLIHFSKSENCKD
VFIEKQKGEILGVVIVESGWGSILPTVIIANMMHGGPAEKSGKLNIGDQIMSINGTSLVG
LPLSTCQSIIKGLKNQSRVKLNIVRCPPVTTVLIRRPDLRYQLGFSVQNGIICSLMRGGI
AERGGVRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMKTMPAAMYRLLTAQEQPVY
I
NT seq 2526 nt   +upstreamnt  +downstreamnt
atgaaccacttggagggctccgcggaggtggaggtggccgacgaggcgccaggaggggag
gtgaacgagtccgtggaggccgacctggagcaccccgaggtggaggaagagcagcagccg
cagccgtcgcccccgccgcccgcaggtcacgcacccgaggaccaccgcgcgcatccggcg
ccgccgccgccgccaccaccgcaggaggaggaggaggagcgcggcgagtgcctggctcgc
tcggccagcaccgagagcggcttccacaaccacacggacaccgctgagggcgacgtgctc
gccgcggcccgagacggctacgaggcggagcgcgcgcaggacgccgacgatgagagcgcc
tacgccgtgcagtaccggcccgaggccgaggagtacacggagcaggcggaggccgagcac
gccgaggcggcgcagcggcgcgcgctgcccaaccacctgcacttccactcgctggagcac
gaggaagccatgaacgccgcctactcgggctatgtctacacgcaccggctcttccaccgc
gccgaggacgagccctacgccgagccctacgccgactacggcggcctccaggagcacgtg
tacgaggagatcggggacgcgcctgagctggaggcgcgcgacggcctgcggctctatgag
cgggagcgcgacgaggcggccgcctaccgccaggaggccctaggcgcgcggctgcaccac
tacgacgagcgctccgacggcgagtccgacagccccgagaaggaggcggagttcgcgccc
tacccgcgcatggacagttatgagcaggaagaggacatcgaccagatcgtggccgaggtc
aagcagagcatgagctcgcagagcctcgacaaggcggccgaagacatgcccgaggcggag
caggacctggagcgcgccccgaccccgggagggggacaccccgacagccctgggctgcca
gcacctgccgggcagcagcagcgagttgtgggaaccccgggaggcagcgaggttggtcag
cggtacagcaaggaaaagagggatgccatctcgctggccatcaaggacatcaaggaggcc
atcgaagaagtgaaaaccaggaccatccgttcgccttacacccccgacgaacccaaagag
cccatctgggtcatgcgccaggacattagccccacaagggactgtgacgaccagaggccc
gtggacggagattctccgtctcctggcagttcctcacccctgggtgctgagtcatcaatc
acaccccttcatcccggtgaccccacggaagcctccactaataaagagtcaagaaaaagc
ttggcttcattcccaacctacgttgaagttcctggaccctgcgaccctgaagacttgatc
gatggaattatttttgctgccaattaccttggttccactcagctactctcagacaaaact
ccctccaaaaacgtgcgcatgatgcaggcccaggaagcagtaagccggatcaagacggcc
cagaaattagccaaaagcaggaagaaggctcctgaaggcgaatctcagccaatgactgag
gtggacctcttcatctccacccagaggatcaaagtgttgaatgcagatacacaggagcct
atgatggaccaccctctgaggaccatttcctacatcgcagacattgggaacatcgtcgtg
ctgatggcccgcaggcggatgccccgctccaactcccaggagaatgtggaggcctctcac
ccatcccaggatgcaaaacggcagtacaagatgatctgtcatgtctttgagtctgaggac
gcccagctgatcgcacagtccatcgggcaggccttcagcgttgcataccaggagttcctc
agggccaacgggattaacccagaagacctgagccaaaaggagtacagcgacctgctcaac
acccaggacatgtacaacgatgacctgatccacttctccaagtcggaaaactgcaaagat
gtcttcatagagaagcagaaaggagaaatcctgggagttgtgattgtggagtctggctgg
ggatccattctgccaaccgtgatcattgccaacatgatgcacggaggccccgccgagaag
tcggggaagctgaacatcggggaccagatcatgtccattaacggcaccagcctggtgggc
ctgcccctgtccacctgccagagcatcattaagggcttaaagaaccagtcccgcgtgaag
ctgaacatcgtgaggtgccccccagtgaccacagtgctaattaggaggccggaccttcgc
taccagctgggtttcagcgtgcagaatggaattatctgtagcctcatgagagggggaata
gctgagagaggaggtgtccgcgtgggacatcggatcattgaaatcaacggccagagtgtc
gtagccacaccacacgagaagatcgtccacatactctccaatgctgttggggagatccac
atgaagacaatgccagcagccatgtacagactgctgacagcccaggagcagcccgtttac
atctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
3D Structure (3)   
   PDB (3)   
Protein domain (6)   
   Pfam (6)   
All databases (30)   

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